Build:
- 0
2026-06-24 13:54.51: New job: build molenc.5.0.0 (349115fd1cb3) 2026-06-24 13:54.51: Waiting for resource in pool day11-builds 2026-06-24 16:00.03: Got resource from pool day11-builds 2026-06-24 16:00.03: [profile full] build molenc.5.0.0 2026-06-24 16:00.03: build molenc.5.0.0 (349115fd1cb3) === DEPENDENCIES (19 transitive) === base-bigarray.base 2e16f77d4cae base-threads.base c9e7bdbf5823 base-unix.base 7d1428be9ddb batteries.3.10.0 3a8b7aeb2b17 bst.7.1.0 93f96e79d4cb camlp-streams.5.0.1 28f363162dde conf-python-3.9.0.0 6d72fcfa5947 conf-rdkit.1 86320d042a70 csexp.1.5.2 610c78f17734 dolog.4.0.0 277d80d7a963 dune.3.23.1 848a72441e15 dune-configurator.3.23.1 bc97ce98d8a9 minicli.5.0.2 0aa0a091666d num.1.6 110cee7a7e2e ocaml.4.14.4 b047fb9251f4 ocaml-base-compiler.4.14.4 d3b7ccb2c6fb ocaml-config.2 2d9c209f5590 ocamlfind.1.9.8 214dd418ac02 parmap.1.2.5 d90fd02d799c === STDOUT === Processing: [default: loading data] [molenc.5.0.0: dl] [molenc.5.0.0: extract] -> retrieved molenc.5.0.0 (https://opam.ocaml.org/cache) [molenc: dune build] + /home/opam/.opam/default/bin/dune "build" "-p" "molenc" "-j" "39" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) - (cd _build/default && /home/opam/.opam/default/bin/ocamlc.opt -w -40 -g -bin-annot -I src/.molenc.objs/byte -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -no-alias-deps -open Molenc -o src/.molenc.objs/byte/molenc__Utls.cmo -c -impl src/utls.ml) - File "src/utls.ml", line 332, characters 13-31: - 332 | Array.sort Pervasives.compare xs; - ^^^^^^^^^^^^^^^^^^ - Alert deprecated: module Stdlib.Pervasives - Use Stdlib instead. - - If you need to stay compatible with OCaml < 4.07, you can use the - stdlib-shims library: https://github.com/ocaml/stdlib-shims - (cd _build/default && /home/opam/.opam/default/bin/ocamlc.opt -w -40 -g -bin-annot -I src/.molenc.objs/byte -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -no-alias-deps -open Molenc -o src/.molenc.objs/byte/molenc__Atom_env.cmo -c -impl src/atom_env.ml) - File "src/atom_env.ml", line 30, characters 16-32: - 30 | let strings = BatString.nsplit s ~by:"," in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - File "src/atom_env.ml", line 50, characters 22-38: - 50 | let layer_strings = BatString.nsplit s ~by:";" in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - (cd _build/default && /home/opam/.opam/default/bin/ocamlc.opt -w -40 -g -bin-annot -I src/.molenc.objs/byte -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -no-alias-deps -open Molenc -o src/.molenc.objs/byte/molenc__MyList.cmo -c -impl src/myList.ml) - File "src/myList.ml", line 27, characters 14-30: - 27 | map of_str (BatString.nsplit s' ~by:";") - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - (cd _build/default && /home/opam/.opam/default/bin/ocamlopt.opt -w -40 -g -I src/.molenc.objs/byte -I src/.molenc.objs/native -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -intf-suffix .ml -no-alias-deps -open Molenc -o src/.molenc.objs/native/molenc__Utls.cmx -c -impl src/utls.ml) - File "src/utls.ml", line 332, characters 13-31: - 332 | Array.sort Pervasives.compare xs; - ^^^^^^^^^^^^^^^^^^ - Alert deprecated: module Stdlib.Pervasives - Use Stdlib instead. - - If you need to stay compatible with OCaml < 4.07, you can use the - stdlib-shims library: https://github.com/ocaml/stdlib-shims - (cd _build/default && /home/opam/.opam/default/bin/ocamlc.opt -w -40 -g -bin-annot -I src/.molenc.objs/byte -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -no-alias-deps -open Molenc -o src/.molenc.objs/byte/molenc__Ap_types.cmo -c -impl src/ap_types.ml) - File "src/ap_types.ml", line 54, characters 25-41: - 54 | let dist_strings = BatString.nsplit line ~by:" " in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - (cd _build/default && /home/opam/.opam/default/bin/ocamlopt.opt -w -40 -g -I src/.molenc.objs/byte -I src/.molenc.objs/native -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -intf-suffix .ml -no-alias-deps -open Molenc -o src/.molenc.objs/native/molenc__Atom_env.cmx -c -impl src/atom_env.ml) - File "src/atom_env.ml", line 30, characters 16-32: - 30 | let strings = BatString.nsplit s ~by:"," in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - File "src/atom_env.ml", line 50, characters 22-38: - 50 | let layer_strings = BatString.nsplit s ~by:";" in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - (cd _build/default && /home/opam/.opam/default/bin/ocamlopt.opt -w -40 -g -I src/.molenc.objs/byte -I src/.molenc.objs/native -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -intf-suffix .ml -no-alias-deps -open Molenc -o src/.molenc.objs/native/molenc__MyList.cmx -c -impl src/myList.ml) - File "src/myList.ml", line 27, characters 14-30: - 27 | map of_str (BatString.nsplit s' ~by:";") - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. - (cd _build/default && /home/opam/.opam/default/bin/ocamlopt.opt -w -40 -g -I src/.molenc.objs/byte -I src/.molenc.objs/native -I /home/opam/.opam/default/lib/batteries -I /home/opam/.opam/default/lib/batteries/unthreaded -I /home/opam/.opam/default/lib/bst -I /home/opam/.opam/default/lib/camlp-streams -I /home/opam/.opam/default/lib/dolog -I /home/opam/.opam/default/lib/num -I /home/opam/.opam/default/lib/ocaml/threads -intf-suffix .ml -no-alias-deps -open Molenc -o src/.molenc.objs/native/molenc__Ap_types.cmx -c -impl src/ap_types.ml) - File "src/ap_types.ml", line 54, characters 25-41: - 54 | let dist_strings = BatString.nsplit line ~by:" " in - ^^^^^^^^^^^^^^^^ - Alert deprecated: BatString.nsplit - Use split_on_string instead. -> compiled molenc.5.0.0 [molenc: cp] + /usr/bin/cp "bin/molenc_common.py" "/home/opam/.opam/default/bin/molenc_common.py" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) [molenc: cp] + /usr/bin/cp "bin/molenc_type_atoms.py" "/home/opam/.opam/default/bin/molenc_type_atoms.py" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) [molenc: cp] + /usr/bin/cp "bin/molenc_scan.py" "/home/opam/.opam/default/bin/molenc_scan.py" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) [molenc: cp] + /usr/bin/cp "bin/molenc.sh" "/home/opam/.opam/default/bin/molenc.sh" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) [molenc: cp] + /usr/bin/cp "bin/molenc_scan.sh" "/home/opam/.opam/default/bin/molenc_scan.sh" (CWD=/home/opam/.opam/default/.opam-switch/build/molenc.5.0.0) -> installed molenc.5.0.0 [WARNING] Opam package conf-rdkit.1 depends on the following system packages that can no longer be found: librdkit-dev python3-rdkit === STDERR === 2026-06-24 16:00.32: OK: build molenc.5.0.0 (runc: 4.6s, disk: 16KB) 2026-06-24 16:00.32: Job succeeded