2026-06-24 13:54.51: New job: build acpc.1.1.1 (2e35d5aaba08)
2026-06-24 13:54.51: Waiting for resource in pool day11-builds
2026-06-24 16:00.32: Got resource from pool day11-builds
2026-06-24 16:00.32: [profile full] build acpc.1.1.1
2026-06-24 16:00.32: build acpc.1.1.1 (2e35d5aaba08)
=== DEPENDENCIES (21 transitive) ===
  base-bigarray.base                                 2e16f77d4cae
  base-threads.base                                  c9e7bdbf5823
  base-unix.base                                     7d1428be9ddb
  batteries.3.6.0                                    44fb95af4a28
  bitv.2.1                                           b81131182699
  camlp-streams.5.0.1                                28f363162dde
  conf-autoconf.0.2                                  676e4452dc37
  conf-gnuplot.0.1                                   9c22f9d2dd5d
  csexp.1.5.2                                        610c78f17734
  dolog.3.0                                          a7fc771d3d6d
  dune.3.23.1                                        848a72441e15
  dune-configurator.3.23.1                           bc97ce98d8a9
  num.1.6                                            110cee7a7e2e
  obuild.0.2.2                                       797d55b0b90e
  ocaml.4.14.4                                       b047fb9251f4
  ocaml-base-compiler.4.14.4                         d3b7ccb2c6fb
  ocaml-config.2                                     2d9c209f5590
  ocamlbuild.0.16.1                                  7e0d6aadb209
  ocamlfind.1.9.8                                    214dd418ac02
  parmap.1.2.5                                       d90fd02d799c
  vector3.1.0.0                                      2fb327be3dca
=== STDOUT ===
Processing: [default: loading data]
[acpc.1.1.1: dl]
[acpc.1.1.1: extract]
-> retrieved acpc.1.1.1  (https://opam.ocaml.org/cache)
[acpc: obuild configure]
+ /home/opam/.opam/default/bin/obuild "configure" (CWD=/home/opam/.opam/default/.opam-switch/build/acpc.1.1.1)
- Configuring ACPC-1.0...
- Detected 4 CPU cores, setting default parallelism to 4
[acpc: obuild build]
+ /home/opam/.opam/default/bin/obuild "build" (CWD=/home/opam/.opam/default/.opam-switch/build/acpc.1.1.1)
- [ 1 of 20] Compiling Amino_acid                    
- [ 2 of 20] Compiling My_utils                      
- File "my_utils.ml", line 125, characters 4-18:
- 125 |     Pervasives.min      (* a fun   *)
-           ^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- File "my_utils.ml", line 126, characters 4-23:
- 126 |     Pervasives.infinity (* a value *)
-           ^^^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- File "my_utils.ml", line 132, characters 4-18:
- 132 |     Pervasives.max          (* a fun   *)
-           ^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- File "my_utils.ml", line 133, characters 4-27:
- 133 |     Pervasives.neg_infinity (* a value *)
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- File "my_utils.ml", line 500, characters 34-52:
- 500 |   A.fast_sort (fun (a,_) (b,_) -> Pervasives.compare a b) arr;
-                                         ^^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- File "my_utils.ml", line 520, characters 44-62:
- 520 |   let ans = L.fast_sort (fun (_,a) (_,b) -> Pervasives.compare a b) ans in
-                                                   ^^^^^^^^^^^^^^^^^^
- Alert deprecated: module Stdlib.Pervasives
- Use Stdlib instead.
- 
- If you need to stay compatible with OCaml < 4.07, you can use the 
- stdlib-shims library: https://github.com/ocaml/stdlib-shims
- 
- [ 3 of 20] Compiling ROC                           
- [ 4 of 20] Compiling Atom                          
- [ 5 of 20] Compiling Mol2_parser                   
- [ 6 of 20] Compiling Autocorr                      
- [ 7 of 20] Compiling Dist_matrix                   
- [ 8 of 20] Compiling Kde                           
- [ 9 of 20] Compiling Mol2_tool                     
- [10 of 20] Compiling Broto_1984_autocorr           
- [11 of 20] Compiling Ac                            
- [12 of 20] Compiling Big_ac                        
- [13 of 20] Linking executable dist/build/acpc_mol2tool/acpc_mol2tool
- [14 of 20] Linking executable dist/build/broto84/broto84
- [15 of 20] Linking executable dist/build/acpc_big/acpc_big
- [16 of 20] Linking executable dist/build/acpc/acpc
- [17 of 20] Checking dist/build/acpc_mol2tool
- [18 of 20] Checking dist/build/broto84
- [19 of 20] Checking dist/build/acpc
- [20 of 20] Checking dist/build/acpc_big
-> compiled  acpc.1.1.1
[acpc: cp]
+ /usr/bin/cp "dist/build/acpc/acpc" "dist/build/acpc_big/acpc_big" "dist/build/acpc_mol2tool/acpc_mol2tool" "/home/opam/.opam/default/bin" (CWD=/home/opam/.opam/default/.opam-switch/build/acpc.1.1.1)
-> installed acpc.1.1.1
[WARNING] Opam package conf-gnuplot.0.1 depends on the following system package that can no longer be found: gnuplot-x11

=== STDERR ===

2026-06-24 16:01.23: OK: build acpc.1.1.1 (runc: 6.6s, disk: 11KB)
2026-06-24 16:01.23: Job succeeded